This page is part of the MyHealth@Eu Laboratory Report (v0.0.1: QA Preview) based on FHIR (HL7® FHIR® Standard) R4. This is the current published version. For a full list of available versions, see the Directory of published versions

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Resource Profile: Body structure: Laboratory

This profile defines how to represent Body Structure in HL7 FHIR for the purpose of this guide.

Usage:

• Use this Resource Profile: Bundle: Laboratory
• Refer to this Resource Profile: Specimen: Laboratory

Formal Views of Profile Content

Description of Profiles, Differentials, Snapshots and how the different presentations work.

• Differential Table
• Key Elements Table
• Snapshot Table
• Statistics/References
• All

This structure is derived from BodyStructureEuLab

Name	Flags	Card.	Type	Description & Constraints
BodyStructure		0..*	BodyStructureEuLab	Specific and identified anatomical structure
extension:laterality	O	0..1	R5 BodyStructure.includedStructure.laterality	Extension Obligations Actor handle LabReportHandler
value[x]		1..1	CodeableConcept	Value of extension Binding: eHDSI Body Site Laterality (required)
morphology	O	0..1	CodeableConcept	Kind of Structure Binding: eHDSI Morphologic Abnormality with exceptions (required) Obligations Actor handle LabReportHandler
location	O	0..1	CodeableConcept	Body site Binding: eHDSI Body Site with exceptions (required) Obligations Actor handle LabReportHandler
locationQualifier	O	0..*	CodeableConcept	Body site modifier Binding: eHDSI Body Structure Location Qualifier with exceptions (required) Obligations Actor handle LabReportHandler
Documentation for this format

Terminology Bindings (Differential)

Path	Conformance	ValueSet	URI
BodyStructure.extension:laterality.value[x]	required	EHDSIBodySiteLaterality http://terminology.ehdsi.eu/ValueSet/eHDSIBodySiteLaterality from this IG
BodyStructure.morphology	required	EHDSIMorphologicAbnormalityWithExceptions http://fhir.ehdsi.eu/laboratory/ValueSet/eHDSIMorphologicAbnormalityWithExceptions from this IG
BodyStructure.location	required	EHDSIBodySiteWithExceptions http://fhir.ehdsi.eu/laboratory/ValueSet/eHDSIBodySiteWithExceptions from this IG
BodyStructure.locationQualifier	required	EHDSIBodyStructureLocationWithExceptions http://fhir.ehdsi.eu/laboratory/ValueSet/eHDSIBodyStructureLocationWithExceptions from this IG

Name	Flags	Card.	Type	Description & Constraints
BodyStructure		0..*	BodyStructureEuLab	Specific and identified anatomical structure
implicitRules	?!Σ	0..1	uri	A set of rules under which this content was created
laterality	O	0..1	(Complex)	Extension URL: http://hl7.org/fhir/5.0/StructureDefinition/extension-BodyStructure.includedStructure.laterality Obligations Actor handle LabReportHandler
extension		0..0
url		1..1	uri	"http://hl7.org/fhir/5.0/StructureDefinition/extension-BodyStructure.includedStructure.laterality"
value[x]		1..1	CodeableConcept	Value of extension Binding: eHDSI Body Site Laterality (required)
modifierExtension	?!	0..*	Extension	Extensions that cannot be ignored
active	?!Σ	0..1	boolean	Whether this record is in active use
morphology	OΣ	0..1	CodeableConcept	Kind of Structure Binding: eHDSI Morphologic Abnormality with exceptions (required) Obligations Actor handle LabReportHandler
location	OΣ	0..1	CodeableConcept	Body site Binding: eHDSI Body Site with exceptions (required) Obligations Actor handle LabReportHandler
locationQualifier	O	0..*	CodeableConcept	Body site modifier Binding: eHDSI Body Structure Location Qualifier with exceptions (required) Obligations Actor handle LabReportHandler
patient	Σ	1..1	Reference(Patient)	Who this is about
Documentation for this format

Terminology Bindings

Path	Conformance	ValueSet	URI
BodyStructure.extension:laterality.value[x]	required	EHDSIBodySiteLaterality http://terminology.ehdsi.eu/ValueSet/eHDSIBodySiteLaterality from this IG
BodyStructure.morphology	required	EHDSIMorphologicAbnormalityWithExceptions http://fhir.ehdsi.eu/laboratory/ValueSet/eHDSIMorphologicAbnormalityWithExceptions from this IG
BodyStructure.location	required	EHDSIBodySiteWithExceptions http://fhir.ehdsi.eu/laboratory/ValueSet/eHDSIBodySiteWithExceptions from this IG
BodyStructure.locationQualifier	required	EHDSIBodyStructureLocationWithExceptions http://fhir.ehdsi.eu/laboratory/ValueSet/eHDSIBodyStructureLocationWithExceptions from this IG

Constraints

Id	Grade	Path(s)	Details	Requirements
dom-2	error	BodyStructure	If the resource is contained in another resource, it SHALL NOT contain nested Resources : contained.contained.empty()
dom-3	error	BodyStructure	If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource : contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().as(canonical) | %resource.descendants().as(uri) | %resource.descendants().as(url))) or descendants().where(reference = '#').exists() or descendants().where(as(canonical) = '#').exists() or descendants().where(as(canonical) = '#').exists()).not()).trace('unmatched', id).empty()
dom-4	error	BodyStructure	If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated : contained.meta.versionId.empty() and contained.meta.lastUpdated.empty()
dom-5	error	BodyStructure	If a resource is contained in another resource, it SHALL NOT have a security label : contained.meta.security.empty()
dom-6	best practice	BodyStructure	A resource should have narrative for robust management : text.`div`.exists()
ele-1	error	**ALL** elements	All FHIR elements must have a @value or children : hasValue() or (children().count() > id.count())
ext-1	error	**ALL** extensions	Must have either extensions or value[x], not both : extension.exists() != value.exists()

Name	Flags	Card.	Type	Description & Constraints
BodyStructure		0..*	BodyStructureEuLab	Specific and identified anatomical structure
id	Σ	0..1	id	Logical id of this artifact
meta	Σ	0..1	Meta	Metadata about the resource
implicitRules	?!Σ	0..1	uri	A set of rules under which this content was created
language		0..1	code	Language of the resource content Binding: CommonLanguages (preferred): A human language. Additional Bindings Purpose AllLanguages Max Binding
text		0..1	Narrative	Text summary of the resource, for human interpretation
contained		0..*	Resource	Contained, inline Resources
Slices for extension		0..*	Extension	Extension Slice: Unordered, Open by value:url
laterality	O	0..1	(Complex)	Extension URL: http://hl7.org/fhir/5.0/StructureDefinition/extension-BodyStructure.includedStructure.laterality Obligations Actor handle LabReportHandler
id		0..1	string	Unique id for inter-element referencing
extension		0..0
url		1..1	uri	"http://hl7.org/fhir/5.0/StructureDefinition/extension-BodyStructure.includedStructure.laterality"
value[x]		1..1	CodeableConcept	Value of extension Binding: eHDSI Body Site Laterality (required)
modifierExtension	?!	0..*	Extension	Extensions that cannot be ignored
identifier	Σ	0..*	Identifier	Bodystructure identifier
active	?!Σ	0..1	boolean	Whether this record is in active use
morphology	OΣ	0..1	CodeableConcept	Kind of Structure Binding: eHDSI Morphologic Abnormality with exceptions (required) Obligations Actor handle LabReportHandler
location	OΣ	0..1	CodeableConcept	Body site Binding: eHDSI Body Site with exceptions (required) Obligations Actor handle LabReportHandler
locationQualifier	O	0..*	CodeableConcept	Body site modifier Binding: eHDSI Body Structure Location Qualifier with exceptions (required) Obligations Actor handle LabReportHandler
description	Σ	0..1	string	Text description
patient	Σ	1..1	Reference(Patient)	Who this is about
Documentation for this format

Terminology Bindings

Path	Conformance	ValueSet	URI
BodyStructure.language	preferred	CommonLanguages Additional Bindings Purpose AllLanguages Max Binding http://hl7.org/fhir/ValueSet/languages from the FHIR Standard
BodyStructure.extension:laterality.value[x]	required	EHDSIBodySiteLaterality http://terminology.ehdsi.eu/ValueSet/eHDSIBodySiteLaterality from this IG
BodyStructure.morphology	required	EHDSIMorphologicAbnormalityWithExceptions http://fhir.ehdsi.eu/laboratory/ValueSet/eHDSIMorphologicAbnormalityWithExceptions from this IG
BodyStructure.location	required	EHDSIBodySiteWithExceptions http://fhir.ehdsi.eu/laboratory/ValueSet/eHDSIBodySiteWithExceptions from this IG
BodyStructure.locationQualifier	required	EHDSIBodyStructureLocationWithExceptions http://fhir.ehdsi.eu/laboratory/ValueSet/eHDSIBodyStructureLocationWithExceptions from this IG

Constraints

Id	Grade	Path(s)	Details	Requirements
dom-2	error	BodyStructure	If the resource is contained in another resource, it SHALL NOT contain nested Resources : contained.contained.empty()
dom-3	error	BodyStructure	If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource : contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().as(canonical) | %resource.descendants().as(uri) | %resource.descendants().as(url))) or descendants().where(reference = '#').exists() or descendants().where(as(canonical) = '#').exists() or descendants().where(as(canonical) = '#').exists()).not()).trace('unmatched', id).empty()
dom-4	error	BodyStructure	If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated : contained.meta.versionId.empty() and contained.meta.lastUpdated.empty()
dom-5	error	BodyStructure	If a resource is contained in another resource, it SHALL NOT have a security label : contained.meta.security.empty()
dom-6	best practice	BodyStructure	A resource should have narrative for robust management : text.`div`.exists()
ele-1	error	**ALL** elements	All FHIR elements must have a @value or children : hasValue() or (children().count() > id.count())
ext-1	error	**ALL** extensions	Must have either extensions or value[x], not both : extension.exists() != value.exists()

This structure is derived from BodyStructureEuLab

Summary

Differential View

This structure is derived from BodyStructureEuLab

Name	Flags	Card.	Type	Description & Constraints
BodyStructure		0..*	BodyStructureEuLab	Specific and identified anatomical structure
extension:laterality	O	0..1	R5 BodyStructure.includedStructure.laterality	Extension Obligations Actor handle LabReportHandler
value[x]		1..1	CodeableConcept	Value of extension Binding: eHDSI Body Site Laterality (required)
morphology	O	0..1	CodeableConcept	Kind of Structure Binding: eHDSI Morphologic Abnormality with exceptions (required) Obligations Actor handle LabReportHandler
location	O	0..1	CodeableConcept	Body site Binding: eHDSI Body Site with exceptions (required) Obligations Actor handle LabReportHandler
locationQualifier	O	0..*	CodeableConcept	Body site modifier Binding: eHDSI Body Structure Location Qualifier with exceptions (required) Obligations Actor handle LabReportHandler
Documentation for this format

Terminology Bindings (Differential)

Path	Conformance	ValueSet	URI
BodyStructure.extension:laterality.value[x]	required	EHDSIBodySiteLaterality http://terminology.ehdsi.eu/ValueSet/eHDSIBodySiteLaterality from this IG
BodyStructure.morphology	required	EHDSIMorphologicAbnormalityWithExceptions http://fhir.ehdsi.eu/laboratory/ValueSet/eHDSIMorphologicAbnormalityWithExceptions from this IG
BodyStructure.location	required	EHDSIBodySiteWithExceptions http://fhir.ehdsi.eu/laboratory/ValueSet/eHDSIBodySiteWithExceptions from this IG
BodyStructure.locationQualifier	required	EHDSIBodyStructureLocationWithExceptions http://fhir.ehdsi.eu/laboratory/ValueSet/eHDSIBodyStructureLocationWithExceptions from this IG

Key Elements View

Name	Flags	Card.	Type	Description & Constraints
BodyStructure		0..*	BodyStructureEuLab	Specific and identified anatomical structure
implicitRules	?!Σ	0..1	uri	A set of rules under which this content was created
laterality	O	0..1	(Complex)	Extension URL: http://hl7.org/fhir/5.0/StructureDefinition/extension-BodyStructure.includedStructure.laterality Obligations Actor handle LabReportHandler
extension		0..0
url		1..1	uri	"http://hl7.org/fhir/5.0/StructureDefinition/extension-BodyStructure.includedStructure.laterality"
value[x]		1..1	CodeableConcept	Value of extension Binding: eHDSI Body Site Laterality (required)
modifierExtension	?!	0..*	Extension	Extensions that cannot be ignored
active	?!Σ	0..1	boolean	Whether this record is in active use
morphology	OΣ	0..1	CodeableConcept	Kind of Structure Binding: eHDSI Morphologic Abnormality with exceptions (required) Obligations Actor handle LabReportHandler
location	OΣ	0..1	CodeableConcept	Body site Binding: eHDSI Body Site with exceptions (required) Obligations Actor handle LabReportHandler
locationQualifier	O	0..*	CodeableConcept	Body site modifier Binding: eHDSI Body Structure Location Qualifier with exceptions (required) Obligations Actor handle LabReportHandler
patient	Σ	1..1	Reference(Patient)	Who this is about
Documentation for this format

Terminology Bindings

Path	Conformance	ValueSet	URI
BodyStructure.extension:laterality.value[x]	required	EHDSIBodySiteLaterality http://terminology.ehdsi.eu/ValueSet/eHDSIBodySiteLaterality from this IG
BodyStructure.morphology	required	EHDSIMorphologicAbnormalityWithExceptions http://fhir.ehdsi.eu/laboratory/ValueSet/eHDSIMorphologicAbnormalityWithExceptions from this IG
BodyStructure.location	required	EHDSIBodySiteWithExceptions http://fhir.ehdsi.eu/laboratory/ValueSet/eHDSIBodySiteWithExceptions from this IG
BodyStructure.locationQualifier	required	EHDSIBodyStructureLocationWithExceptions http://fhir.ehdsi.eu/laboratory/ValueSet/eHDSIBodyStructureLocationWithExceptions from this IG

Constraints

Id	Grade	Path(s)	Details	Requirements
dom-2	error	BodyStructure	If the resource is contained in another resource, it SHALL NOT contain nested Resources : contained.contained.empty()
dom-3	error	BodyStructure	If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource : contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().as(canonical) | %resource.descendants().as(uri) | %resource.descendants().as(url))) or descendants().where(reference = '#').exists() or descendants().where(as(canonical) = '#').exists() or descendants().where(as(canonical) = '#').exists()).not()).trace('unmatched', id).empty()
dom-4	error	BodyStructure	If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated : contained.meta.versionId.empty() and contained.meta.lastUpdated.empty()
dom-5	error	BodyStructure	If a resource is contained in another resource, it SHALL NOT have a security label : contained.meta.security.empty()
dom-6	best practice	BodyStructure	A resource should have narrative for robust management : text.`div`.exists()
ele-1	error	**ALL** elements	All FHIR elements must have a @value or children : hasValue() or (children().count() > id.count())
ext-1	error	**ALL** extensions	Must have either extensions or value[x], not both : extension.exists() != value.exists()

Snapshot View

Name	Flags	Card.	Type	Description & Constraints
BodyStructure		0..*	BodyStructureEuLab	Specific and identified anatomical structure
id	Σ	0..1	id	Logical id of this artifact
meta	Σ	0..1	Meta	Metadata about the resource
implicitRules	?!Σ	0..1	uri	A set of rules under which this content was created
language		0..1	code	Language of the resource content Binding: CommonLanguages (preferred): A human language. Additional Bindings Purpose AllLanguages Max Binding
text		0..1	Narrative	Text summary of the resource, for human interpretation
contained		0..*	Resource	Contained, inline Resources
Slices for extension		0..*	Extension	Extension Slice: Unordered, Open by value:url
laterality	O	0..1	(Complex)	Extension URL: http://hl7.org/fhir/5.0/StructureDefinition/extension-BodyStructure.includedStructure.laterality Obligations Actor handle LabReportHandler
id		0..1	string	Unique id for inter-element referencing
extension		0..0
url		1..1	uri	"http://hl7.org/fhir/5.0/StructureDefinition/extension-BodyStructure.includedStructure.laterality"
value[x]		1..1	CodeableConcept	Value of extension Binding: eHDSI Body Site Laterality (required)
modifierExtension	?!	0..*	Extension	Extensions that cannot be ignored
identifier	Σ	0..*	Identifier	Bodystructure identifier
active	?!Σ	0..1	boolean	Whether this record is in active use
morphology	OΣ	0..1	CodeableConcept	Kind of Structure Binding: eHDSI Morphologic Abnormality with exceptions (required) Obligations Actor handle LabReportHandler
location	OΣ	0..1	CodeableConcept	Body site Binding: eHDSI Body Site with exceptions (required) Obligations Actor handle LabReportHandler
locationQualifier	O	0..*	CodeableConcept	Body site modifier Binding: eHDSI Body Structure Location Qualifier with exceptions (required) Obligations Actor handle LabReportHandler
description	Σ	0..1	string	Text description
patient	Σ	1..1	Reference(Patient)	Who this is about
Documentation for this format

Terminology Bindings

Path	Conformance	ValueSet	URI
BodyStructure.language	preferred	CommonLanguages Additional Bindings Purpose AllLanguages Max Binding http://hl7.org/fhir/ValueSet/languages from the FHIR Standard
BodyStructure.extension:laterality.value[x]	required	EHDSIBodySiteLaterality http://terminology.ehdsi.eu/ValueSet/eHDSIBodySiteLaterality from this IG
BodyStructure.morphology	required	EHDSIMorphologicAbnormalityWithExceptions http://fhir.ehdsi.eu/laboratory/ValueSet/eHDSIMorphologicAbnormalityWithExceptions from this IG
BodyStructure.location	required	EHDSIBodySiteWithExceptions http://fhir.ehdsi.eu/laboratory/ValueSet/eHDSIBodySiteWithExceptions from this IG
BodyStructure.locationQualifier	required	EHDSIBodyStructureLocationWithExceptions http://fhir.ehdsi.eu/laboratory/ValueSet/eHDSIBodyStructureLocationWithExceptions from this IG

Constraints

Id	Grade	Path(s)	Details	Requirements
dom-2	error	BodyStructure	If the resource is contained in another resource, it SHALL NOT contain nested Resources : contained.contained.empty()
dom-3	error	BodyStructure	If the resource is contained in another resource, it SHALL be referred to from elsewhere in the resource or SHALL refer to the containing resource : contained.where((('#'+id in (%resource.descendants().reference | %resource.descendants().as(canonical) | %resource.descendants().as(uri) | %resource.descendants().as(url))) or descendants().where(reference = '#').exists() or descendants().where(as(canonical) = '#').exists() or descendants().where(as(canonical) = '#').exists()).not()).trace('unmatched', id).empty()
dom-4	error	BodyStructure	If a resource is contained in another resource, it SHALL NOT have a meta.versionId or a meta.lastUpdated : contained.meta.versionId.empty() and contained.meta.lastUpdated.empty()
dom-5	error	BodyStructure	If a resource is contained in another resource, it SHALL NOT have a security label : contained.meta.security.empty()
dom-6	best practice	BodyStructure	A resource should have narrative for robust management : text.`div`.exists()
ele-1	error	**ALL** elements	All FHIR elements must have a @value or children : hasValue() or (children().count() > id.count())
ext-1	error	**ALL** extensions	Must have either extensions or value[x], not both : extension.exists() != value.exists()

This structure is derived from BodyStructureEuLab

Summary

Other representations of profile: CSV, Excel, Schematron