Generated Narrative: ValueSet eHDSIMicroorganism

• Include these codes as defined in http://snomed.info/sct

  Code	Display
  12006007	Ureaplasma urealyticum
  398426003	Salmonella group O:2
  840533007	SARS-CoV-2
  417443008	Klebsiella granulomatis
  40886007	Klebsiella oxytoca
  56415008	Klebsiella pneumoniae
  55905000	Vibrio vulnificus
  65186004	Klebsiella pneumoniae ss. ozaenae
  17688001	Klebsiella pneumoniae ss. rhinoscleromatis
  50136005	Salmonella Typhimurium
  43492007	Group B streptococcus
  18054009	Rickettsia rickettsii
  18214000	Legionella anisa
  110378009	Salmonella enterica
  22592008	Legionella birminghamensis
  450611004	Legionella bozemanae
  58923007	Legionella cincinnatiensis
  113720002	Legionella dumoffii
  85729005	Shigella flexneri
  58939000	Legionella hackeliae
  39739007	Legionella jordanis
  103452007	Legionella lansingensis
  89605004	Legionella longbeachae
  116379006	Legionella maceachernii
  116380009	Legionella micdadei
  116197008	Staphylococcus, coagulase negative
  638008	Legionella oakridgensis
  80897008	Legionella pneumophila
  103461007	Legionella tucsonensis
  9861002	Streptococcus pneumoniae
  8147000	Legionella wadsworthii
  75953000	Vibrio cholerae
  116401006	Leptospira interrogans
  55032007	Listeria ivanovii
  36094007	Listeria monocytogenes
  416832000	Raoultella ornithinolytica
  30769009	Rickettsia akari
  398393000	Salmonella bongori
  73525009	Salmonella Enteritidis
  85908006	Salmonella Paratyphi B
  55462008	Shigella boydii
  3092008	Staphylococcus aureus
  51320008	Mycobacterium africanum
  80166006	Streptococcus pyogenes
  44760001	Mycobacterium asiaticum
  83723009	Mycobacterium avium
  27142009	Mycobacterium bovis
  113846008	Mycobacterium conspicuum
  4649006	Toxoplasma gondii
  61708000	Mycobacterium farcinogenes
  22417000	Trichomonas vaginalis
  243378003	Mycobacterium fortuitum
  70463000	Mycobacterium gastri
  103476004	Mycobacterium genavense
  21996001	Mycobacterium haemophilum
  113851002	Mycobacterium interjectum
  113852009	Mycobacterium intermedium
  83841006	Mycobacterium intracellulare
  1507005	Mycobacterium kansasii
  43199008	Vibrio fluvialis
  58242002	Mycobacterium leprae
  28382009	Vibrio metschnikovii
  73576007	Mycobacterium malmoense
  11736008	Vibrio parahaemolyticus
  58869008	Mycobacterium marinum
  70801007	Mycobacterium microti
  113856007	Mycobacterium mucogenicum
  91336002	Mycobacterium porcinum
  20141004	Mycobacterium scrofulaceum
  54365000	Yersinia pestis
  74212009	Mycobacterium senegalense
  79817008	Mycobacterium shimoidei
  84180005	Mycobacterium simiae
  65613000	Mycobacterium szulgai
  113861009	Mycobacterium tuberculosis
  113858008	Mycobacterium tuberculosis complex
  40713003	Mycobacterium ulcerans
  54925005	Mycobacterium vaccae
  58663006	Mycobacterium xenopi
  243377008	Mycobacteroides chelonae
  5056007	Mycoplasma genitalium
  58720004	Mycoplasma pneumoniae
  416264004	Raoultella planticola
  68704007	Neisseria gonorrhoeae
  17872004	Neisseria meningitidis
  32691002	Rickettsia conorii
  79284001	Rickettsia typhi
  397502001	Salmonella enterica subsp. arizonae
  398467008	Salmonella group O:4
  79128009	Salmonella Paratyphi A
  32488009	Salmonella Paratyphi C
  43612004	Shigella dysenteriae
  4298009	Shigella sonnei
  72904005	Treponema pallidum
  88274000	Trypanosoma cruzi
  45749000	Vibrio alginolyticus
  36764009	Vibrio cincinnatiensis
  6387008	Vibrio furnissii
  11776003	Vibrio mimicus
  34706006	Plasmodium
  30020004	Plasmodium falciparum
  56395006	Plasmodium malariae
  18508006	Plasmodium ovale
  74746009	Plasmodium vivax
  79909001	Pneumocystis jirovecii
  65255000	Yersinia enterocolitica
  90530002	Yersinia pseudotuberculosis
  62496009	Bartonella
  91288006	Acinetobacter baumannii
  82550008	Acinetobacter calcoaceticus
  77045006	Acinetobacter haemolyticus
  252000	Acinetobacter johnsonii
  13879009	Acinetobacter junii
  78065002	Enterococcus faecalis
  12220009	Coxiella
  22533000	Coxiella burnetii
  4716008	Entamoeba histolytica
  10262005	Enterococcus malodoratus
  46466005	Bordetella
  34872001	Vibrio
  56596006	Histoplasma capsulatum
  2429008	Aspergillus
  67168003	Cryptococcus neoformans
  30949009	Enterococcus casseliflavus
  113724006	Enterococcus dispar
  53233007	Enterococcus gallinarum
  103436009	Enterococcus pseudoavium
  112283007	Escherichia coli
  35029001	Babesia
  21927003	Bacillus anthracis
  8191000	Clostridium
  2785000	Enterococcus
  71268004	Haemophilus
  19454009	Helicobacter
  75032006	Klebsiella
  243368001	Mycobacterium
  243352007	Bartonella bacilliformis
  103510000	Bartonella henselae
  30345008	Treponema
  65615007	Blastomyces dermatitidis
  5247005	Bordetella pertussis
  113497007	Borrelia garinii
  5851001	Corynebacterium diphtheriae
  24224000	Brucella abortus
  72829003	Brucella melitensis
  48317004	Brucella suis
  103428000	Corynebacterium ulcerans
  113674000	Burkholderia mallei
  116399000	Burkholderia pseudomallei
  40614002	Campylobacter coli
  9892000	Campylobacter concisus
  116037008	Campylobacter curvus
  64589009	Campylobacter fetus ss. fetus
  113528007	Campylobacter gracilis
  66543000	Campylobacter jejuni
  87402003	Campylobacter mucosalis
  113525005	Campylobacter rectus
  103427005	Campylobacter upsaliensis
  87875008	Enterococcus avium
  46464008	Enterococcus durans
  90272000	Enterococcus faecium
  73852008	Enterococcus hirae
  38004008	Enterococcus mundtii
  103437000	Enterococcus raffinosus
  51526001	Francisella tularensis
  7757008	Acinetobacter
  112277009	Borrelia
  26250004	Brucella
  414324002	Burkholderia
  35408001	Campylobacter
  16241000	Chlamydia
  77086004	Corynebacterium
  17579001	Cryptococcus
  50255000	Francisella
  63938009	Chlamydia trachomatis
  14590003	Chlamydophila psittaci
  7527002	Legionella
  26764003	Leptospira
  23566007	Listeria
  78981005	Genus Mycoplasma
  59083001	Neisseria
  31169007	Clostridium baratii
  13080008	Clostridium botulinum
  57032008	Pseudomonas
  27268008	Salmonella
  77352002	Shigella
  58800005	Streptococcus
  29680004	Ureaplasma
  4668009	Yersinia
  78181009	Giardia lamblia
  64889004	Haemophilus ducreyi
  433669003	Grimontia hollisae
  44470000	Haemophilus influenzae
  30917009	Clostridium tetani
  80774000	Helicobacter pylori
  23439005	Coccidioides immitis
  113841003	Mycobacterium avium ss paratuberculosis
  103456005	Legionella pneumophila ss. fraseri
  103450004	Legionella geestiana
  29111009	Mycobacterium agri
  113844006	Mycobacterium brumae
  6199007	Mycobacterium diernhoferi
  24871004	Mycobacterium gordonae
  48134004	Mycobacterium aurum
  909007	Mycobacterium parafortuitum
  53114006	Mycobacterium smegmatis
  17966003	Taenia solium
  103457001	Legionella pneumophila ss. pascullei
  89896008	Mycobacterium chitae
  24618002	Mycobacterium gilvum
  113849001	Mycobacterium hiberniae
  433053006	Listeria ivanovii subspecies ivanovii
  243284003	Listeria ivanovii londoniensis
  113853004	Mycobacterium lentiflavum
  43091008	Listeria seeligeri
  51459000	Mycobacterium neoaurum
  113857003	Mycobacterium novocastrense
  18400002	Klebsiella pneumoniae ss. pneumoniae
  78112006	Mycobacterium phlei
  72130005	Mycobacterium rhodesiae
  113860005	Mycobacterium triplex
  407479009	Influenza A virus
  415597009	Streptococcus anginosus group
  52462004	Legionella cherrii
  28109006	Legionella erythra
  17083009	Legionella feeleii
  103451000	Legionella gratiana
  18097004	Malassezia
  3128001	Legionella israelensis
  89709001	Legionella jamestowniensis
  387798006	Photobacterium damselae
  28625000	Taenia
  103454008	Legionella moravica
  38322001	Legionella parisiensis
  16439004	Trichinella spiralis
  113809009	Leptospira borgpetersenii
  113813002	Leptospira noguchii
  113816005	Leptospira weilii
  50384007	Mumps virus
  113839004	Mycobacterium alvei
  27365009	Mycobacterium austroafricanum
  113840002	Mycobacterium avium ss avium
  113845007	Mycobacterium confluentis
  385509008	Mycobacterium elephantis
  127522008	Mycobacterium goodii
  113848009	Mycobacterium hassiacum
  113850001	Mycobacterium hodleri
  385507005	Mycobacterium mageritense
  21433000	Mycobacterium nonchromogenicum
  113859000	Mycobacterium peregrinum
  62644004	Mycobacterium pulveris
  385508000	Mycobacterium septicum
  20973006	Mycobacterium thermoresistibile
  72477006	Mycobacterium tokaiense
  432714000	Legionella beliardensis
  127523003	Mycobacterium wolinskyi
  113838007	Mycobacteroides abscessus
  103448007	Legionella brunensis
  407480007	Influenza B virus
  1290001	Metamycoplasma hominis
  431990001	Tetragenococcus solitarius
  6246005	Treponema pallidum ss. pertenue
  17298000	Legionella rubrilucens
  87271006	Legionella sainthelens
  72814000	Legionella santicrucis
  113808001	Legionella waltersii
  103462000	Legionella worsleiensis
  53447008	Rickettsia australis
  30974007	Rickettsia canadensis
  114220007	Rickettsia japonica
  62987004	Vibrio cholerae, O1
  28499009	Rickettsia prowazekii
  85288000	Rickettsia sibirica
  28335002	Rift Valley fever virus
  5210005	Rubella virus
  243328000	Non-fermentative Gram-negative bacillus
  398428002	Salmonella enterica subsp. diarizonae
  398508004	Salmonella enterica subsp. enterica
  398371005	Salmonella enterica subsp. houtenae
  398620001	Salmonella enterica subsp. indica
  26630006	Yellow fever virus
  398488004	Salmonella enterica subsp. salamae
  5595000	Salmonella enterica subspecies enterica serovar Typhi
  113810004	Leptospira inadai
  113811000	Leptospira kirschneri
  113815009	Leptospira santarosai
  76327009	Borrelia burgdorferi
  59206002	Gram-positive coccus
  22339002	Gamma-hemolytic streptococcus
  62944002	Hepatitis C virus
  37220005	Histoplasma duboisii
  3265006	Candida
  448130009	Campylobacter avium
  447727006	Campylobacter canadensis
  413643004	Beta-hemolytic Streptococcus, group A
  84210007	Campylobacter fetus
  60817000	Campylobacter fetus ss. venerealis
  113522008	Campylobacter helveticus
  87172008	Gram-negative bacillus
  416679003	Campylobacter hominis
  9041007	Campylobacter hyointestinalis
  113524009	Campylobacter jejuni ss jejuni
  432537009	Campylobacter lanienae
  116386003	Campylobacter lari
  447797004	Campylobacter peloridis
  113526006	Campylobacter showae
  19030005	Human immunodeficiency virus
  91524009	Campylobacter sputorum
  113376007	Acinetobacter calcoaceticus-Acinetobacter baumannii complex
  424206003	Ebolavirus
  27334000	Ehrlichia
  64735005	Escherichia
  60631002	Alpha-hemolytic streptococcus
  424421007	Genus Marburgvirus
  115046007	Photobacterium
  83088009	Acinetobacter lwoffii
  103511001	Bartonella quintana
  59343002	Anaerobic bacteria
  83410001	Gram-negative diplococcus
  32452004	HAV - Hepatitis A virus
  5933001	Clostridioides difficile
  113565009	Clostridium argentiense
  83285000	Enteropathogenic Escherichia coli
  19084008	Clostridium butyricum
  420364006	Anaplasma phagocytophilum
  8672004	Coccidioides
  34212000	Colorado tick fever virus
  79875007	Crimean-Congo hemorrhagic fever virus
  450862004	Cryptococcus gattii
  243468002	Cryptococcus neoformans var neoformans
  415904003	Cryptococcus neoformans serotype A
  83821001	Cryptosporidium
  62065006	Rickettsia
  103513003	Bartonella elizabethae
  103560006	Cyclospora
  65119002	Staphylococcus
  103561005	Cyclospora cayetanensis
  417005000	Tetragenococcus
  40740003	Genus Trypanosoma
  34348001	Dengue virus
  59250001	Ehrlichia chaffeensis
  38324000	Entamoeba
  81665004	Hepatitis B virus
  78475006	Hepatitis E virus
  55008000	Enterobius vermicularis
  81951003	Histoplasma
  19965007	Human herpes simplex virus
  6415009	Human respiratory syncytial virus
  127535004	Staphylococcus, coagulase positive
  713611009	Mycobacterium chlorophenolicum
  85944001	Lassa virus
  3764006	Trichomonas
  13126002	Vaccinia virus
  125048009	Vibrio cholerae serogroup O139
  705167005	Yersinia enterocolitica subsp. palearctica
  61949005	Toxoplasma
  77199003	Rickettsia montanensis
  243568000	Variola virus
  415863007	Yersinia enterocolitica serogroup O:5, 27
  32323003	Tick-borne encephalitis virus
  113842005	Mycobacterium avium ss silvaticum
  125022001	Shigella boydii, serovar 1
  125023006	Shigella boydii, serovar 2
  125024000	Shigella boydii, serovar 3
  124995002	Shigella dysenteriae, serovar 1
  124996001	Shigella dysenteriae, serovar 2
  66635002	Vibrio cholerae serotype Ogawa
  49918008	Plasmodium knowlesi
  52584002	Measles morbillivirus
  430579009	Mycobacterium caprae
  11428003	Western equine encephalomyelitis virus
  398429005	Salmonella group O:11
  103433001	Yersinia enterocolitica serogroup O:9
  10514003	Norwalk virus
  5885000	Mycobacterium flavescens
  708346003	Mycobacterium florentinum
  103453002	Legionella londiniensis
  103474001	Mycobacterium fortuitum complex
  60903008	Tacaribe virus complex
  59881000	Rabies virus
  103455009	Legionella nautarum
  113961008	Staphylococcus aureus ss aureus
  50269000	Staphylococcus aureus ss. anaerobius
  103458006	Legionella pneumophila ss. pneumophila
  85738007	Rickettsia parkeri
  103459003	Legionella quinlivanii
  112351003	Vibrio cholerae serotype Inaba
  64930007	Legionella spiritensis
  58432001	St. Louis encephalitis virus
  708329001	Mycobacterium senuense
  708324006	Mycobacterium setense
  57311007	West Nile virus
  45662006	Mycobacterium terrae
  1179074001	Salmonella group E
  398349000	Salmonella group O:13
  398559003	Salmonella group O:9
  428765006	Mycobacterium terrae complex
  40333002	Mycobacterium triviale
  58503001	Mycobacterium, avium-intracellulare group
  110379001	Mycobacterium, non-TB
  103430003	Yersinia enterocolitica serogroup O:3
  103432006	Yersinia enterocolitica serogroup O:8
  705166001	Yersinia enterocolitica subsp. enterocolitica
  50471002	Zika virus
  407359000	Norovirus
  113523003	Campylobacter jejuni ss doylei
  448945001	Campylobacter lari subspecies lari
  363769000	Entamoeba histolytica/Entamoeba dispar complex
  77712002	Francisella novicida
  83675005	Corynebacterium diphtheriae type gravis
  60502008	Francisella tularensis ss. holarctica
  91508008	Francisella tularensis ss. tularensis
  103429008	Enterohemorrhagic Escherichia coli, serotype O157:H7
  70876001	Corynebacterium diphtheriae type intermedius
  13755001	Corynebacterium diphtheriae type mitis
  243255007	Corynebacterium diphtheriae var belfanti
  58928003	Campylobacter sputorum ss. sputorum
  86432002	Babesia divergens
  76828008	Babesia microti
  2423009	Chikungunya virus
  243264002	Corynebacterium pseudogenitalium
  13687007	Human alphaherpesvirus 2
  36115006	Human immunodeficiency virus type 2
  55174004	Human poliovirus 2
  65205008	Blastomyces
  416551001	Borrelia afzelii
  3351007	Anaplasma
  58234003	Arenavirus
  53490009	Beta-hemolytic streptococcus
  61419001	Giardia
  53932007	Gram-negative coccobacillus
  83617006	Hepatitis D virus
  40168006	Human herpesvirus 4
  51504002	Cryptosporidium parvum
  9482002	Human papillomavirus
  44172002	Human poliovirus
  62748005	Borrelia hermsii
  785918006	Mycobacteroides
  41704008	Borrelia parkeri
  82945006	Genus Phlebovirus
  243633006	Genus Enterovirus
  64979004	California encephalitis virus
  115651002	Dermatophyte
  431444000	Genus Grimontia
  116395006	Enterohemorrhagic Escherichia coli
  49445003	Genus Hantavirus
  113377003	Acinetobacter genospecies 3
  11471007	Gram-positive diplococcus
  24986006	Borrelia turicatae
  106544002	Enterobacteriaceae
  243509006	Histoplasma capsulatum var capsulatum
  15302007	Human alphaherpesvirus 1
  19551004	Human alphaherpesvirus 3
  84101006	Human coronavirus
  89293008	Human immunodeficiency virus type I
  407498006	Human parainfluenza viruses
  22580008	Human poliovirus 1
  16362001	Human poliovirus 3
  398506000	Vibrio cholerae, non-O1
  415533006	Slow growing mycobacteria
  415855006	Yersinia enterocolitica serogroup O:1,2a,3
  43454006	Treponema pallidum ss. pallidum
  443377006	Toxigenic Corynebacterium diphtheriae
  24763006	Vibrio cholerae serotype Hikojima
  415819003	Vibrio cholerae, non-O1/non-O139
  407538006	Yellow Fever virus group
  125018006	Shigella flexneri, serovar 5
  125027007	Shigella boydii, serovar 6
  125003005	Shigella dysenteriae, serovar 9
  125031001	Shigella boydii, serovar 10
  406497008	Shigella dysenteriae 15
  125009009	Shigella flexneri, serovar 2a
  838549008	Shiga toxin-producing Escherichia coli
  125035005	Shigella boydii, serovar 14
  406494001	Shigella dysenteriae 11
  124999008	Shigella dysenteriae, serovar 5
  125005003	Shigella flexneri, serovar 1
  125013002	Shigella flexneri, serovar 3b
  116495007	Scotochromogenic mycobacteria
  406489001	Shigella boydii 17
  125033003	Shigella boydii, serovar 12
  125025004	Shigella boydii, serovar 4
  125029005	Shigella boydii, serovar 8
  406496004	Shigella dysenteriae 13
  124997005	Shigella dysenteriae, serovar 3
  125001007	Shigella dysenteriae, serovar 7
  406501003	Shigella flexneri 5a [V:3,4]
  125007006	Shigella flexneri, serovar 1b
  125011000	Shigella flexneri, serovar 3
  125016005	Shigella flexneri, serovar 4a
  35439004	Seoul virus
  406488009	Shigella boydii 16
  406490005	Shigella boydii 18
  125032008	Shigella boydii, serovar 11
  125034009	Shigella boydii, serovar 13
  125036006	Shigella boydii, serovar 15
  125026003	Shigella boydii, serovar 5
  125028002	Shigella boydii, serovar 7
  125030000	Shigella boydii, serovar 9
  406495000	Shigella dysenteriae 12
  406498003	Shigella dysenteriae 14
  125004004	Shigella dysenteriae, serovar 10
  124998000	Shigella dysenteriae, serovar 4
  125000008	Shigella dysenteriae, serovar 6
  125002000	Shigella dysenteriae, serovar 8
  406500002	Shigella flexneri 4c [IV:7,8]
  406502005	Shigella flexneri 5b [V:7,8]
  125006002	Shigella flexneri, serovar 1a
  125008001	Shigella flexneri, serovar 2
  125010004	Shigella flexneri, serovar 2b
  125012007	Shigella flexneri, serovar 3a
  125015009	Shigella flexneri, serovar 4
  125017001	Shigella flexneri, serovar 4b
  125019003	Shigella flexneri, serovar 6
  443401009	Nontoxigenic Corynebacterium diphtheriae
  311508002	Sabia virus
  398542008	Salmonella I, group O:7
  398567006	Salmonella I, group O:4
  398334008	Salmonella I, group O:9
  397577006	Salmonella categorized by O antigen
  398436006	Salmonella group O:3,10
  40754006	Puumala virus
  398364000	Salmonella group O:8
  116494006	Rapid growing mycobacteria
  114218009	Rickettsia africae
  398420009	Salmonella I, group O:2
  45156000	Rubivirus
  115407004	Haemophilus influenzae, not b
  698162001	Neisseria meningitidis serogroup E
  430914003	Mycobacterium pinnipedii
  52779006	Hantaan virus
  57757007	Human coxsackievirus
  103442008	Haemophilus influenzae type b
  414789006	Mycobacterium canettii
  125042005	Neisseria meningitidis serogroup Z
  414649007	Mammalian tick-borne virus group
  333873003	Mycobacterium fortuitum subsp fortuitum
  705094007	Mycobacteroides abscessus subspecies bolletii
  103480009	Neisseria meningitidis serogroup B
  125041003	Neisseria meningitidis serogroup X
  243625005	Lymphocytic choriomeningitis virus and Lassa complex
  71489006	Machupo virus
  417770000	Human respiratory syncytial virus A
  417771001	Human respiratory syncytial virus B
  64694002	Human rotavirus
  75356003	Mycobacterium fortuitum ss. acetamidolytica
  704995002	Mycobacteroides abscessus subspecies abscessus
  407540001	Japanese encephalitis virus group
  103479006	Neisseria meningitidis serogroup A
  103481008	Neisseria meningitidis serogroup C
  26352009	Junin virus
  103483006	Neisseria meningitidis serogroup W
  103482001	Neisseria meningitidis serogroup Y
  302593007	Lancefield group streptococcus
  433050009	Legionella busanensis
  311506003	Guanarito virus
  406645005	Coccidioides posadasii
  417722006	Cryptosporidium hominis
  407298008	Escherichia coli serogroup O145
  407280009	Escherichia coli serogroup O103
  131260002	Escherichia coli serogroup O26
  28375005	Flavivirus
  23930001	Francisella tularensis ss. mediasiatica
  243604005	Dengue virus subgroup
  116398008	Diarrheagenic Escherichia coli
  131261003	Escherichia coli serogroup O111
  116662007	Dobrava-Belgrade virus
  127500001	Enterococcus, group I
  127501002	Enterococcus, group II
  127502009	Enterococcus, group III
  407284000	Enterohemorrhagic Escherichia coli, serotype O104:H21
  432832005	Francisella tularensis subspecies novicida
  407287007	Enterohemorrhagic Escherichia coli, serotype O113:H21
  407290001	Enterohemorrhagic Escherichia coli, serotype O118:H12
  407291002	Enterohemorrhagic Escherichia coli, serotype O118:H16
  407289005	Enterohemorrhagic Escherichia coli, serotype O118:H2
  407222004	Enterohemorrhagic Escherichia coli, serotype O128:H2
  407295006	Enterohemorrhagic Escherichia coli, serotype O128:H45
  407294005	Enterohemorrhagic Escherichia coli, serotype O128:nonmotile
  124994003	Enterohemorrhagic Escherichia coli, serotype O157:non-motile
  372926008	Chlamydophila
  708336000	Mycobacterium mantenii
  712664000	Vancomycin intermediate Enterococcus faecalis
  449411006	Brucella inopinata
  713924007	Non-hemolytic Streptococcus agalactiae
  432460004	Campylobacter insulaenigrae
  442001008	Andes orthohantavirus
  33610009	Attenuated Mycobacterium bovis
  447728001	Campylobacter cuniculorum
  243600001	Alphavirus
  103449004	Legionella fairfieldensis
  113807006	Legionella quateirensis
  103465003	Legionella pneumophila serogroup 3
  26733000	Mycobacterium lepraemurium
  720761007	Yersinia enterocolitica biotype 3
  113847004	Mycobacterium cookii
  103463005	Legionella pneumophila serogroup 1
  37900004	Trichinella
  767450004	Trichinella nativa
  63603005	Primate erythroparvovirus 1
  767451000	Trichinella nelsoni
  725894000	Influenza virus
  1179032006	Salmonella group D
  9939008	Mycobacterium fallax
  103467006	Legionella pneumophila serogroup 5
  103468001	Legionella pneumophila serogroup 6
  103460008	Legionella shakespearei
  14121003	Legionella steigerwaltii
  103447002	Legionella adelaidensis
  41304005	Mycobacterium obuense
  243603004	Japanese encephalitis virus
  113812007	Leptospira meyeri
  450536000	Listeria monocytogenes serotype 1/2a
  450537009	Listeria monocytogenes serotype 1/2b
  74028009	Mycobacterium paratuberculosis
  68855006	Molluscum contagiosum virus
  115198006	Non-Sporing Gram Positive Rods
  103464004	Legionella pneumophila serogroup 2
  699415006	Entamoeba histolytica-Entamoeba dispar complex trophozoite
  608932009	Giardia lamblia trophozoite
  1179072002	Salmonella group C
  59774002	Monkeypox virus
  103466002	Legionella pneumophila serogroup 4
  115517006	Legionella, non-pneumophia species
  76776000	Rickettsia bellii
  114221006	Rickettsia massiliae
  79437004	Rickettsia rhipicephali
  29568001	Pediculus humanus capitis
  708341008	Mycobacterium llatzerense
  74917007	Mycobacterium gadium
  115301004	Chlamydia trachomatis, serotype L2
  88520007	Creutzfeldt-Jakob agent
  127512002	Haemophilus influenzae, biotype VIII
  409866001	Alcaligenaceae
  243312005	Fermentative Gram-negative bacillus
  110390006	Entamoeba histolytica cyst
  608963008	Plasmodium falciparum gametocyte
  127508008	Haemophilus influenzae, biotype IV
  417542000	Rotavirus
  413618005	Bacillus cereus group
  127506007	Haemophilus influenzae, biotype II
  127510005	Haemophilus influenzae, biotype VI
  110389002	Entamoeba histolytica trophozoite
  48683001	Genus Pediculus
  112381006	Genus Dependovirus
  115318000	Chlamydia trachomatis, serotype L3
  243601002	Eastern equine encephalitis virus
  115172000	Gram-negative aerobic rod
  81325006	Gram-negative bacterium
  8745002	Gram-positive bacteria
  114229008	Bartonella vinsonii ss vinsonii
  113527002	Campylobacter hyointestinalis ss hyointestinalis
  127505006	Haemophilus influenzae, biotype I
  127507003	Haemophilus influenzae, biotype III
  127509000	Haemophilus influenzae, biotype V
  127511009	Haemophilus influenzae, biotype VII
  243360008	Ehrlichia ewingii
  699416007	Entamoeba histolytica-Entamoeba dispar complex cyst
  608948005	Giardia lamblia cyst
  424470006	Adenoviridae
  83313003	Genus Morbillivirus
  710331003	Anaerobic Campylobacter species
  715335005	Vibrio cholerae serogroup O141
  720759003	Yersinia enterocolitica biotype 1B
  720771009	Yersinia enterocolitica serogroup O:22
  314797000	Simplexvirus
  720758006	Yersinia enterocolitica biotype 1A
  720763005	Yersinia enterocolitica biotype 5
  698164000	Streptococcus agalactiae serotype Ia
  698165004	Streptococcus agalactiae serotype Ia/c
  698166003	Streptococcus agalactiae serotype Ib
  698167007	Streptococcus agalactiae serotype Ib/c
  698168002	Streptococcus agalactiae serotype II
  698169005	Streptococcus agalactiae serotype II/c
  698170006	Streptococcus agalactiae serotype II/R
  608956008	Toxoplasma gondii trophozoite
  698171005	Streptococcus agalactiae serotype III
  698172003	Streptococcus agalactiae serotype III/c
  44106000	Treponema pallidum ss. endemicum
  698173008	Streptococcus agalactiae serotype III/R
  698174002	Streptococcus agalactiae serotype IV
  715358008	Streptococcus agalactiae serotype IX
  698177009	Streptococcus agalactiae serotype V
  698178004	Streptococcus agalactiae serotype V/c
  698179007	Streptococcus agalactiae serotype V/R
  715357003	Streptococcus agalactiae serotype VI
  698180005	Streptococcus agalactiae serotype VII
  698181009	Streptococcus agalactiae serotype VIII
  115077009	Vibrionaceae
  415607008	Streptococcus pneumoniae Danish serotype 1
  415608003	Streptococcus pneumoniae Danish serotype 10A
  428124003	Streptococcus pneumoniae Danish serotype 10B
  698103009	Streptococcus pneumoniae Danish serotype 10C
  441602004	Streptococcus pneumoniae Danish serotype 10F
  720791002	Yersinia enterocolitica biotype 1A serotype O:36
  419071000	Streptococcus pneumoniae Danish serotype 11A
  720799000	Yersinia enterocolitica biotype 2 serotype O:5,27
  698104003	Streptococcus pneumoniae Danish serotype 11B
  415857003	Yersinia enterocolitica serogroup O:13a,13b
  698105002	Streptococcus pneumoniae Danish serotype 11C
  720765003	Yersinia enterocolitica serogroup O:6,30
  698106001	Streptococcus pneumoniae Danish serotype 11D
  698107005	Streptococcus pneumoniae Danish serotype 11F
  698108000	Streptococcus pneumoniae Danish serotype 12A
  698109008	Streptococcus pneumoniae Danish serotype 12B
  419305002	Streptococcus pneumoniae Danish serotype 12F
  428366009	Streptococcus pneumoniae Danish serotype 13
  103498008	Streptococcus pneumoniae Danish serotype 14
  443239003	Streptococcus pneumoniae Danish serotype 15A
  415610001	Streptococcus pneumoniae Danish serotype 15B
  443240001	Streptococcus pneumoniae Danish serotype 15C
  698110003	Streptococcus pneumoniae Danish serotype 15F
  698111004	Streptococcus pneumoniae Danish serotype 16A
  698112006	Streptococcus pneumoniae Danish serotype 16F
  698113001	Streptococcus pneumoniae Danish serotype 17A
  420138009	Streptococcus pneumoniae Danish serotype 17F
  698114007	Streptococcus pneumoniae Danish serotype 18A
  698115008	Streptococcus pneumoniae Danish serotype 18B
  418451009	Streptococcus pneumoniae Danish serotype 18C
  698116009	Streptococcus pneumoniae Danish serotype 18F
  415611002	Streptococcus pneumoniae Danish serotype 19A
  698117000	Streptococcus pneumoniae Danish serotype 19B
  698118005	Streptococcus pneumoniae Danish serotype 19C
  419915004	Streptococcus pneumoniae Danish serotype 19F
  419527005	Streptococcus pneumoniae Danish serotype 2
  698097002	Streptococcus pneumoniae Danish serotype 21
  441566007	Streptococcus pneumoniae Danish serotype 22A
  420216004	Streptococcus pneumoniae Danish serotype 22F
  698098007	Streptococcus pneumoniae Danish serotype 23A
  427741005	Streptococcus pneumoniae Danish serotype 23B
  418217008	Streptococcus pneumoniae Danish serotype 23F
  698119002	Streptococcus pneumoniae Danish serotype 24A
  698120008	Streptococcus pneumoniae Danish serotype 24B
  698121007	Streptococcus pneumoniae Danish serotype 24F
  698123005	Streptococcus pneumoniae Danish serotype 25A
  698124004	Streptococcus pneumoniae Danish serotype 25F
  698125003	Streptococcus pneumoniae Danish serotype 27
  444352000	Streptococcus pneumoniae Danish serotype 28A
  444353005	Streptococcus pneumoniae Danish serotype 28F
  131363003	Streptococcus pneumoniae Danish serotype 29
  103497003	Streptococcus pneumoniae Danish serotype 3
  443670000	Streptococcus pneumoniae Danish serotype 31
  698127006	Streptococcus pneumoniae Danish serotype 32A
  698128001	Streptococcus pneumoniae Danish serotype 32F
  442049002	Streptococcus pneumoniae Danish serotype 33A
  698129009	Streptococcus pneumoniae Danish serotype 33B
  698130004	Streptococcus pneumoniae Danish serotype 33C
  698131000	Streptococcus pneumoniae Danish serotype 33D
  420148006	Streptococcus pneumoniae Danish serotype 33F
  767201007	Streptococcus pneumoniae Danish serotype 34
  698132007	Streptococcus pneumoniae Danish serotype 35A
  698133002	Streptococcus pneumoniae Danish serotype 35B
  698134008	Streptococcus pneumoniae Danish serotype 35C
  698135009	Streptococcus pneumoniae Danish serotype 35F
  698136005	Streptococcus pneumoniae Danish serotype 36
  698137001	Streptococcus pneumoniae Danish serotype 37
  767204004	Streptococcus pneumoniae Danish serotype 38
  722350008	Toxigenic Corynebacterium diphtheriae type mitis
  767208001	Streptococcus pneumoniae Danish serotype 39
  415616007	Streptococcus pneumoniae Danish serotype 4
  767274003	Streptococcus pneumoniae Danish serotype 40
  698139003	Streptococcus pneumoniae Danish serotype 41A
  698140001	Streptococcus pneumoniae Danish serotype 41F
  767285001	Streptococcus pneumoniae Danish serotype 42
  115082002	Tribe Rickettsieae
  767284002	Streptococcus pneumoniae Danish serotype 43
  767283008	Streptococcus pneumoniae Danish serotype 44
  767282003	Streptococcus pneumoniae Danish serotype 45
  767281005	Streptococcus pneumoniae Danish serotype 46
  698147003	Streptococcus pneumoniae Danish serotype 47A
  698148008	Streptococcus pneumoniae Danish serotype 47F
  767275002	Streptococcus pneumoniae Danish serotype 48
  419871001	Streptococcus pneumoniae Danish serotype 5
  443156004	Streptococcus pneumoniae Danish serotype 6A
  418902003	Streptococcus pneumoniae Danish serotype 6B
  698095005	Streptococcus pneumoniae Danish serotype 6C
  719028004	Streptococcus pneumoniae Danish serotype 6D
  415619000	Streptococcus pneumoniae Danish serotype 7A
  698102004	Streptococcus pneumoniae Danish serotype 7B
  698096006	Streptococcus pneumoniae Danish serotype 7C
  103499000	Streptococcus pneumoniae Danish serotype 7F
  418759005	Streptococcus pneumoniae Danish serotype 8
  419167001	Streptococcus pneumoniae Danish serotype 9A
  418883007	Streptococcus pneumoniae Danish serotype 9L
  103500009	Streptococcus pneumoniae Danish serotype 9N
  418322006	Streptococcus pneumoniae Danish serotype 9V
  710333000	Vancomycin resistant enterococcus vanA strain
  415621005	Streptococcus pneumoniae serogroup 10
  363768008	Streptococcus pneumoniae serogroup 11
  116500005	Streptococcus pneumoniae serogroup 12
  415609006	Streptococcus pneumoniae serogroup 15
  131362008	Streptococcus pneumoniae serogroup 16
  47465002	Vesicular stomatitis New Jersey virus
  131361001	Streptococcus pneumoniae serogroup 17
  418147001	Streptococcus pneumoniae serogroup 18
  127541006	Streptococcus pneumoniae serogroup 19
  767202000	Streptococcus pneumoniae serogroup 20
  363767003	Streptococcus pneumoniae serogroup 22
  415613004	Streptococcus pneumoniae serogroup 23
  698099004	Streptococcus pneumoniae serogroup 24
  698122000	Streptococcus pneumoniae serogroup 25
  443155000	Streptococcus pneumoniae serogroup 28
  698126002	Streptococcus pneumoniae serogroup 32
  415614005	Streptococcus pneumoniae serogroup 33
  429569005	Streptococcus pneumoniae serogroup 35
  698138006	Streptococcus pneumoniae serogroup 41
  698146007	Streptococcus pneumoniae serogroup 47
  415618008	Streptococcus pneumoniae serogroup 6
  441523000	Streptococcus pneumoniae serogroup 7
  417270004	Streptococcus pneumoniae serogroup 9
  428854005	Streptococcus pyogenes type emm1
  443028006	Streptococcus pyogenes type emm10
  443053009	Streptococcus pyogenes type emm100
  698151001	Streptococcus pyogenes type emm101
  698152008	Streptococcus pyogenes type emm102
  698153003	Streptococcus pyogenes type emm103
  698154009	Streptococcus pyogenes type emm104
  720787007	Yersinia enterocolitica biotype 1A serotype O:14
  698155005	Streptococcus pyogenes type emm105
  720780009	Yersinia enterocolitica biotype 1A serotype O:6,30
  698156006	Streptococcus pyogenes type emm106
  720797003	Yersinia enterocolitica biotype 1B serotype O:20
  698157002	Streptococcus pyogenes type emm107
  720802009	Yersinia enterocolitica biotype 3 serotype O:3
  698158007	Streptococcus pyogenes type emm108
  720775000	Yersinia enterocolitica serogroup O:1,2,3
  698159004	Streptococcus pyogenes type emm109
  732254006	Yersinia enterocolitica serogroup O:19,8
  443060003	Streptococcus pyogenes type emm11
  720870002	Yersinia enterocolitica serogroup O:4,33
  698160009	Streptococcus pyogenes type emm110
  415864001	Yersinia enterocolitica, not O:3; O:8; or O:5,27
  443059008	Streptococcus pyogenes type emm111
  442962001	Streptococcus pyogenes type emm112
  442835005	Streptococcus pyogenes type emm113
  442834009	Streptococcus pyogenes type emm114
  442879008	Streptococcus pyogenes type emm115
  442863007	Streptococcus pyogenes type emm116
  443010009	Streptococcus pyogenes type emm117
  438977000	Streptococcus pyogenes type emm118
  442995007	Streptococcus pyogenes type emm119
  428793005	Streptococcus pyogenes type emm12
  442956006	Streptococcus pyogenes type emm120
  442955005	Streptococcus pyogenes type emm121
  442882003	Streptococcus pyogenes type emm13
  428541006	Streptococcus pyogenes type emm14
  78167007	Cysticercus
  442988003	Streptococcus pyogenes type emm15
  442897000	Streptococcus pyogenes type emm16
  442896009	Streptococcus pyogenes type emm17
  442998009	Streptococcus pyogenes type emm18
  442923005	Streptococcus pyogenes type emm19
  428238003	Streptococcus pyogenes type emm2
  442922000	Streptococcus pyogenes type emm20
  442895008	Streptococcus pyogenes type emm21
  442969005	Streptococcus pyogenes type emm22
  442968002	Streptococcus pyogenes type emm23
  442967007	Streptococcus pyogenes type emm24
  428380002	Spondweni virus group
  442966003	Streptococcus pyogenes type emm25
  442786006	Streptococcus pyogenes type emm26
  442785005	Streptococcus pyogenes type emm27
  427814005	Streptococcus pyogenes type emm28
  442827007	Streptococcus pyogenes type emm29
  442813002	Streptococcus pyogenes type emm3
  443057005	Streptococcus pyogenes type emm30
  443056001	Streptococcus pyogenes type emm31
  443055002	Streptococcus pyogenes type emm32
  443054003	Streptococcus pyogenes type emm33
  442826003	Streptococcus pyogenes type emm34
  442825004	Streptococcus pyogenes type emm35
  442824000	Streptococcus pyogenes type emm36
  442812007	Streptococcus pyogenes type emm37
  442802000	Streptococcus pyogenes type emm38
  442801007	Streptococcus pyogenes type emm39
  427822003	Streptococcus pyogenes type emm4
  442800008	Streptococcus pyogenes type emm40
  442799009	Streptococcus pyogenes type emm41
  442930004	Streptococcus pyogenes type emm42
  442929009	Streptococcus pyogenes type emm43
  438978005	Streptococcus pyogenes type emm44
  442794004	Streptococcus pyogenes type emm45
  442816005	Streptococcus pyogenes type emm46
  442853004	Streptococcus pyogenes type emm47
  427821005	Streptococcus pyogenes type emm48
  442852009	Streptococcus pyogenes type emm49
  429336006	Streptococcus pyogenes type emm5
  442851002	Streptococcus pyogenes type emm50
  442850001	Streptococcus pyogenes type emm51
  442985000	Streptococcus pyogenes type emm52
  443009004	Streptococcus pyogenes type emm53
  443008007	Streptococcus pyogenes type emm54
  443007002	Streptococcus pyogenes type emm55
  442905002	Streptococcus pyogenes type emm56
  442904003	Streptococcus pyogenes type emm57
  428254000	Streptococcus pyogenes type emm58
  442873009	Streptococcus pyogenes type emm59
  442872004	Streptococcus pyogenes type emm6
  443027001	Streptococcus pyogenes type emm60
  439294004	Streptococcus pyogenes type emm61
  442948008	Streptococcus pyogenes type emm62
  442947003	Streptococcus pyogenes type emm63
  442935009	Streptococcus pyogenes type emm64
  442934008	Streptococcus pyogenes type emm65
  442933002	Streptococcus pyogenes type emm66
  442932007	Streptococcus pyogenes type emm67
  442862002	Streptococcus pyogenes type emm68
  442991003	Streptococcus pyogenes type emm69
  443052004	Streptococcus pyogenes type emm7
  443031007	Streptococcus pyogenes type emm70
  442954009	Streptococcus pyogenes type emm71
  442953003	Streptococcus pyogenes type emm72
  427823008	Streptococcus pyogenes type emm73
  442961008	Streptococcus pyogenes type emm74
  442846008	Streptococcus pyogenes type emm75
  441723002	Streptococcus pyogenes type emm76
  428542004	Streptococcus pyogenes type emm77
  442996008	Streptococcus pyogenes type emm78
  442940001	Streptococcus pyogenes type emm79
  443026005	Streptococcus pyogenes type emm8
  442857003	Streptococcus pyogenes type emm80
  442856007	Streptococcus pyogenes type emm81
  442906001	Streptococcus pyogenes type emm82
  443035003	Streptococcus pyogenes type emm83
  443034004	Streptococcus pyogenes type emm84
  443033005	Streptococcus pyogenes type emm85
  443032000	Streptococcus pyogenes type emm86
  442839004	Streptococcus pyogenes type emm87
  442838007	Streptococcus pyogenes type emm88
  429337002	Streptococcus pyogenes type emm89
  442821008	Streptococcus pyogenes type emm9
  428855006	Streptococcus pyogenes type emm90
  442820009	Streptococcus pyogenes type emm91
  442977009	Streptococcus pyogenes type emm92
  442976000	Streptococcus pyogenes type emm93
  442975001	Streptococcus pyogenes type emm94
  442974002	Streptococcus pyogenes type emm95
  442815009	Streptococcus pyogenes type emm96
  442814008	Streptococcus pyogenes type emm97
  442810004	Streptococcus pyogenes type emm98
  442809009	Streptococcus pyogenes type emm99
  722346001	Toxigenic Corynebacterium diphtheriae type gravis
  719913002	Toxigenic Corynebacterium ulcerans
  69090009	Streptococcus, pyogenic group
  116663002	Sin Nombre virus
  783025003	Vancomycin intermediate Enterococcus
  712665004	Vancomycin resistant Enterococcus faecium
  404680007	Vancomycin resistant Staphylococcus aureus
  698216001	Vancomycin susceptible Staphylococcus aureus
  312410004	Variola major virus
  243565002	Slime mold
  40039007	Vesicular stomatitis virus, Argentina
  415820009	Vibrio cholerae, non-O139
  722807007	Vibrio vulnificus biotype 2
  415534000	Small-colony-forming beta-hemolytic group A streptococci
  28732002	Snowshoe hare virus
  720778003	Yersinia enterocolitica biotype 1A serotype O rough
  732253000	Yersinia enterocolitica biotype 1A serotype O:19,8
  720779006	Yersinia enterocolitica biotype 1A serotype O:5
  720784000	Yersinia enterocolitica biotype 1A serotype O:7,13
  720795006	Yersinia enterocolitica biotype 1B serotype O:13a,13b
  720794005	Yersinia enterocolitica biotype 1B serotype O:8
  720869003	Yersinia enterocolitica biotype 3 non-serotypable
  720762000	Yersinia enterocolitica biotype 4
  415854005	Yersinia enterocolitica non-serogroupable
  720768001	Yersinia enterocolitica serogroup O:10
  720774001	Yersinia enterocolitica serogroup O:18
  415859000	Yersinia enterocolitica serogroup O:20
  720772002	Yersinia enterocolitica serogroup O:36
  103431004	Yersinia enterocolitica serogroup O:5
  720785004	Yersinia enterocolitica serogroup O:7,13
  428139002	Yersinia enterocolitica, serogroup O:14
  243637007	Spongiform encephalopathy agent
  41109008	South River virus
  277502005	Tetracycline-resistant Neisseria gonorrhoeae
  277504006	Spectinomycin-resistant Neisseria gonorrhoeae
  397426001	Toxigenic Corynebacterium
  722789000	Toxigenic Corynebacterium diphtheriae type belfanti
  722349008	Toxigenic Corynebacterium diphtheriae type intermedius
  722246003	Toxigenic Corynebacterium pseudotuberculosis
  710347001	Toxigenic Vibrio cholerae, O1
  816145006	Tremellaceae
  115068002	Spirochaetaceae
  87919008	Trivittatus virus
  712666003	Vancomycin intermediate Enterococcus faecium
  406962002	Vancomycin intermediate Staphylococcus aureus
  113727004	Vancomycin resistant Enterococcus
  712663006	Vancomycin resistant Enterococcus faecalis
  710334006	Vancomycin resistant enterococcus vanB strain
  707767003	Vancomycin resistant vanB2 and vanB3 Enterococcus
  80298008	Varicellovirus
  312411000	Variola minor virus
  23498004	Vesicular stomatitis Indiana virus
  81701001	Vesicular stomatitis virus
  13953004	Vesicular stomatitis virus, Brazil
  722806003	Vibrio vulnificus biotype 1
  722808002	Vibrio vulnificus biotype 3
  49872002	Virus
  868196001	Subgenus Sarbecovirus
  720777008	Yersinia enterocolitica biotype 1A non-serotypable
  720786003	Yersinia enterocolitica biotype 1A serotype O:10
  720788002	Yersinia enterocolitica biotype 1A serotype O:16
  720790001	Yersinia enterocolitica biotype 1A serotype O:22
  720871003	Yersinia enterocolitica biotype 1A serotype O:4,33
  720792009	Yersinia enterocolitica biotype 1A serotype O:57
  720781008	Yersinia enterocolitica biotype 1A serotype O:6,31
  720782001	Yersinia enterocolitica biotype 1A serotype O:7,8
  720793004	Yersinia enterocolitica biotype 1B non-serotypable
  720796007	Yersinia enterocolitica biotype 1B serotype O:18
  720798008	Yersinia enterocolitica biotype 1B serotype O:21
  720760008	Yersinia enterocolitica biotype 2
  720800001	Yersinia enterocolitica biotype 2 serotype O:9
  720801002	Yersinia enterocolitica biotype 3 serotype O:1,2,3
  720803004	Yersinia enterocolitica biotype 3 serotype O:5,27
  720804005	Yersinia enterocolitica biotype 4 serotype O:3
  720805006	Yersinia enterocolitica biotype 5 serotype O:2,3
  720764004	Yersinia enterocolitica serogroup O rough
  415856007	Yersinia enterocolitica serogroup O:12, 25
  720769009	Yersinia enterocolitica serogroup O:16
  415858008	Yersinia enterocolitica serogroup O:19
  720776004	Yersinia enterocolitica serogroup O:2,3
  415860005	Yersinia enterocolitica serogroup O:21
  415861009	Yersinia enterocolitica serogroup O:2a,3
  415862002	Yersinia enterocolitica serogroup O:4,32
  363762009	Yersinia enterocolitica serogroup O:48
  720773007	Yersinia enterocolitica serogroup O:57
  720766002	Yersinia enterocolitica serogroup O:6,31
  720767006	Yersinia enterocolitica serogroup O:7,8
  116502002	Yersinia enterocolitica, serogroup O:13
  116503007	Yersinia enterocoltica, serogroup O:8,14
  425092008	Zaire virus
  6895004	Tahyna virus
  424116003	Sudan ebolavirus
  782242007	Shiga toxin-producing Escherichia coli serogroup O153
  792897009	Shiga toxin-producing Escherichia coli serogroup O45
  782265002	Shiga toxin-producing Escherichia coli serogroup O113
  406492002	Shigella boydii 20 [Provisional Serotype SH108(99-4528)]
  77235003	San Angelo virus
  782277007	Shiga toxin-producing Escherichia coli serogroup O137
  782210001	Shiga toxin-producing Escherichia coli serogroup O50
  125014008	Shigella flexneri, serovar 3c
  406504006	Shigella sonnei (Subgroup D)
  32178004	Serra do Navio virus
  782226000	Shiga toxin-producing Escherichia coli serogroup O1
  792860004	Shiga toxin-producing Escherichia coli serogroup O111
  782267005	Shiga toxin-producing Escherichia coli serogroup O118
  792899007	Shiga toxin-producing Escherichia coli serogroup O157
  782245009	Shiga toxin-producing Escherichia coli serogroup O163
  782227009	Shiga toxin-producing Escherichia coli serogroup O2
  782247001	Shiga toxin-producing Escherichia coli serogroup O55
  782233000	Shiga toxin-producing Escherichia coli serogroup O9
  782361008	Shiga toxin-producing Escherichia coli serotype O128:H45
  721980008	Shigella flexneri serovar 6 biotype Manchester
  125020009	Shigella flexneri, serovar X
  792851007	Shiga toxin-producing Escherichia coli serogroup O121
  782274000	Shiga toxin-producing Escherichia coli serogroup O128
  782237004	Shiga toxin-producing Escherichia coli serogroup O14
  792853005	Shiga toxin-producing Escherichia coli serogroup O145
  782246005	Shiga toxin-producing Escherichia coli serogroup O165
  782221005	Shiga toxin-producing Escherichia coli serogroup O22
  792898004	Shiga toxin-producing Escherichia coli serogroup O26
  840389002	Shiga toxin-producing Escherichia coli serogroup O48
  782229007	Shiga toxin-producing Escherichia coli serogroup O5
  782258005	Shiga toxin-producing Escherichia coli serogroup O79
  782280008	Shiga toxin-producing Escherichia coli serogroup O83
  782282000	Shiga toxin-producing Escherichia coli serogroup O91
  406491009	Shigella boydii 19 [Provisional Serotype E16553]
  406493007	Shigella boydii serotype undetermined (Subgroup C)
  646165971000087107	Shigella flexneri 5a
  406503000	Shigella flexneri serotype undetermined (Subgroup B)
  125021008	Shigella flexneri, serovar Y
  427559006	Rubella virus genotype 1D
  398367007	Non-cholerae vibrio
  735350007	Orthohantavirus
  424764001	Orthohepadnavirus
  29724001	Orthopoxvirus
  721920006	Orthopoxvirus species, not Variola virus
  114219001	Rickettsia helvetica
  426612000	Rubella virus genotype 2B
  719032005	Saccharolytic non-hemolytic Acinetobacter
  716530009	Non-multiple drug resistant methicillin resistant Staphylococcus aureus
  116488003	Non-photochromogenic mycobacteria
  449024000	Pandemic Influenza A (H1N1) 2009
  710564002	Panton-Valentine leukocidin producing Staphylococcus aureus
  114217004	Rickettsia aeschlimannii
  698215002	Rickettsia species 364D
  88227009	Rotavirus group D
  698201004	Rubella virus genotype 1H
  409794001	Resistant fungi
  409807008	Penicillin resistant Streptococcus pneumoniae
  277501003	Penicillinase-producing Neisseria gonorrhoeae
  415341005	Rickettsia felis
  312330004	Rickettsia peacockii
  415343008	Rickettsia, typhus group
  89331006	Rotavirus group B
  83358009	Rotavirus group F
  425415004	Rubella virus genotype 1B
  426367009	Rubella virus genotype 1F
  698203001	Rubella virus genotype 1J
  24940009	Non group A rotavirus
  116492005	Photochromogenic mycobacteria
  414964005	Onygenales
  409793007	Resistant bacteria
  409795000	Resistant virus
  422448009	Reston ebolavirus
  699550001	Plasmodium falciparum merozoite
  699553004	Plasmodium falciparum schizont
  608935006	Plasmodium falciparum trophozoite
  608964002	Plasmodium malariae gametocyte
  699561009	Plasmodium malariae merozoite
  699562002	Plasmodium malariae schizont
  608936007	Plasmodium malariae trophozoite
  608965001	Plasmodium ovale gametocyte
  699555006	Plasmodium ovale merozoite
  699557003	Plasmodium ovale schizont
  608937003	Plasmodium ovale trophozoite
  608966000	Plasmodium vivax gametocyte
  699559000	Plasmodium vivax merozoite
  699560005	Plasmodium vivax schizont
  608938008	Plasmodium vivax trophozoite
  437822006	Rickettsia honei
  437823001	Rickettsia slovaca
  415342003	Rickettsia, spotted fever group
  416138003	Rotavirus group A
  31551005	Rotavirus group C
  2864009	Rotavirus group E
  36833002	Rotavirus group G
  425872000	Rubella virus genotype 1a
  427398000	Rubella virus genotype 1C
  426085007	Rubella virus genotype 1E
  426209008	Rubella virus genotype 1G
  698202006	Rubella virus genotype 1I
  425891000	Rubella virus genotype 2A
  427329000	Rubella virus genotype 2C
  710346005	Nontoxigenic Vibrio cholerae, O1
  719031003	Saccharolytic hemolytic Acinetobacter
  45838003	Powassan virus
  407425000	Primate lentivirus group
  84676004	Prion
  416919006	Prokaryote-cell wall absent
  103525000	Prospect Hill virus
  370570004	Protoctista
  406478008	Provisional shigella 3065-93
  406479000	Provisional shigella 3162-96
  406480002	Provisional shigella 88-893 [-: (6)]
  406481003	Provisional shigella 89-141
  406482005	Provisional shigella 93-119
  406483000	Provisional shigella 96-204
  406484006	Provisional shigella 96-265
  406485007	Provisional shigella E28938
  406486008	Provisional shigella E670/74
  406487004	Provisional shigella Y394
  20498000	Mycobacterium chubuense
  416435006	Measles virus, viral envelope M protein variant
  708319008	Mycobacterium timonense
  450544000	Listeria monocytogenes serotype 4c
  385506001	Mycobacterium murale
  703892007	Hepatitis B virus genotype G
  698204007	Measles virus genotype D11
  722355003	Neisseria meningitidis, beta lactamase negative
  450538004	Listeria monocytogenes serotype 1/2c
  450622000	Lujo virus
  426558008	Measles virus genotype A
  426535005	Measles virus genotype D9
  710891006	Methicillin resistant Staphylococcus
  716531008	Multiple drug resistant methicillin resistant Staphylococcus aureus
  725447004	Mumps genotype F
  66940008	Mycobacterium aichiense
  718809000	Mycobacterium parakoreense
  725469006	Human alphaherpesvirus 3 clade 1
  725470007	Human alphaherpesvirus 3 clade 2
  725471006	Human alphaherpesvirus 3 clade 3
  725472004	Human alphaherpesvirus 3 clade 4
  725473009	Human alphaherpesvirus 3 clade 5
  103444009	Haemophilus influenzae type d
  603422006	Hepatitis C virus genotype 1
  103445005	Haemophilus influenzae type e
  103446006	Haemophilus influenzae type f
  722351007	Haemophilus influenzae, beta lactamase negative
  722353005	Haemophilus influenzae, beta lactamase positive
  450543006	Listeria monocytogenes serotype 4a
  414208001	Listeriaceae
  426188007	Measles virus genotype C1
  427706006	Measles virus genotype D5
  426091009	Measles virus genotype G2
  423043004	Human enterovirus A
  725443000	Mumps genotype A
  725451002	Mumps genotype J
  16914000	Mycobacterium piscium
  103441001	Haemophilus influenzae type a
  243370005	Mycobacterium tuberculosis classical variant
  417772008	Human respiratory syncytial virus A1
  417773003	Human respiratory syncytial virus A2
  703887005	Hepatitis B virus genotype B
  417774009	Human respiratory syncytial virus A3
  417790009	Human respiratory syncytial virus A4
  417791008	Human respiratory syncytial virus A5
  417792001	Human respiratory syncytial virus A6
  703891000	Hepatitis B virus genotype F
  417793006	Human respiratory syncytial virus A7
  603425008	Hepatitis C virus genotype 4
  417794000	Human respiratory syncytial virus B1
  417795004	Human respiratory syncytial virus B2
  417796003	Human respiratory syncytial virus B3
  417797007	Human respiratory syncytial virus B4
  603432004	Hepatitis C virus subtype 4d
  450541008	Listeria monocytogenes serotype 3b
  450539007	Listeria monocytogenes serotype 4b
  450547007	Listeria monocytogenes serotype 4e
  84955006	Lumbo virus
  68684004	Hazara virus
  426654002	Measles virus genotype B2
  732208002	Measles virus genotype D1
  425970007	Measles virus genotype D3
  427353006	Measles virus genotype D7
  732206003	Measles virus genotype F
  425966004	Measles virus genotype H1
  417943000	Methicillin susceptible Staphylococcus aureus
  243638002	Human spongiform encephalopathy agent
  416102005	Mitosporic Onygenales
  427501004	Moraxellaceae
  713351000	Multidrug-resistant bacteria
  725445007	Mumps genotype C
  725449001	Mumps genotype H
  725453004	Mumps genotype L
  243376004	Mycobacterium avium brunese
  302561004	Mycobacterium borstelense
  712913003	Mycobacterium europaeum
  712912008	Mycobacterium heraklionense
  712911001	Mycobacterium kyorinense
  708333008	Mycobacterium paragordonae
  712910000	Mycobacterium riyadhense
  78444002	Mycobacterium sphagni
  243373007	Mycobacterium tuberculosis African II variant
  712909005	Mycobacterium vulneris
  414790002	Mycoplasma species, not Mycoplasma pneumoniae
  414809001	Neisseria gonorrhoeae, beta lactamase negative
  603424007	Hepatitis C virus genotype 3
  603426009	Hepatitis C virus genotype 5
  446396002	Influenza A virus subtype H1
  442352004	Influenza A virus subtype H1N1
  603417006	Hepatitis C virus subtype 3a
  603418001	Hepatitis C virus subtype 3b
  446646008	Influenza A virus subtype H3N2
  603419009	Hepatitis C virus subtype 5a
  446647004	Influenza A virus subtype H5
  772827006	Influenza A virus subtype H5N1
  446648009	Influenza A virus subtype H7
  243631008	Hepevirus
  448803002	Influenza A virus subtype N1
  450540009	Listeria monocytogenes serotype 3a
  450542001	Listeria monocytogenes serotype 3c
  450545004	Listeria monocytogenes serotype 4ab
  698150000	Listeria monocytogenes serotype 4bx
  450546003	Listeria monocytogenes serotype 4d
  45404002	Inkoo virus
  450548002	Listeria monocytogenes serotype 7
  423042009	Ivory Coast ebolavirus
  9194001	Jamestown Canyon virus
  732209005	Measles virus genotype B1
  427073007	Measles virus genotype B3
  427182003	Measles virus genotype C2
  427263000	Measles virus genotype D10
  62587007	Jerry Slough virus
  426640005	Measles virus genotype D2
  426261008	Measles virus genotype D4
  426028006	Measles virus genotype D6
  427290009	Measles virus genotype D8
  732207007	Measles virus genotype E
  732210000	Measles virus genotype G1
  425684000	Measles virus genotype G3
  426424002	Measles virus genotype H2
  19708001	Melao virus
  115329001	Methicillin resistant Staphylococcus aureus
  61399004	Keystone virus
  443457000	Methicillin resistant Staphylococcus intermedius
  67732000	Khasan virus
  387961004	Kingdom Animalia
  31006001	Kingdom Plantae
  417396000	Kingdom Protozoa
  103552005	Kingdom Protozoa cyst
  103536007	Kingdom Protozoa gametocyte
  103541004	Kingdom Protozoa oocyst
  103551003	Kingdom Protozoa trophozoite
  417377004	Kingdom Viridiplantae
  1113401000112105	Klebsiella pneumoniae complex
  414754009	Mold resembling Coccidioides immitis
  243606007	Hepacivirus
  44081006	Kuru agent
  30434006	La Crosse virus
  409806004	Multiple drug-resistant Streptococcus pneumoniae
  725444006	Mumps genotype B
  725446008	Mumps genotype D
  725448009	Mumps genotype G
  725450001	Mumps genotype I
  725452009	Mumps genotype K
  725454005	Mumps genotype N
  42024000	Murine poliovirus
  708352002	Mycobacterium algericum
  422839008	Lake Victoria marburgvirus
  703075004	Mycobacterium avium subspecies hominissuis
  66838002	Mycobacterium duvalii
  414577006	Large-colony-forming beta-hemolytic group A streptococci
  709682006	Mycobacterium iranicum
  36249008	Mycobacterium komossence
  113854005	Mycobacterium madagascariense
  718808008	Mycobacterium minnesotense
  9679001	Mycobacterium moriokaense
  707328006	Mycobacterium paraterrae
  58768005	Mycobacterium poriferae
  722251009	Mycobacterium simiae complex
  60558000	Mycobacterium thamnophis
  243372002	Mycobacterium tuberculosis African I variant
  432325006	Legionella drancourtii
  243371009	Mycobacterium tuberculosis Asian variant
  432712001	Legionella drozanskii
  36354002	Mycobacterium tuberculosis hominis
  432453005	Legionella fallonii
  433052001	Legionella gresilensis
  115515003	Legionella longbeachae, serogroup 1
  115516002	Legionella longbeachae, serogroup 2
  113806002	Legionella lytica
  103469009	Legionella pneumophila serogroup 7
  103470005	Legionella pneumophila serogroup 8
  103471009	Legionella pneumophila serogroup 9
  1003646009	Legionella pneumophila serogroup, not serogroup 1
  131322009	Legionella pneumophilia serogroup 10
  131323004	Legionella pneumophilia serogroup 11
  131324005	Legionella pneumophilia serogroup 12
  131325006	Legionella pneumophilia serogroup 13
  131326007	Legionella pneumophilia serogroup 14
  432713006	Legionella rowbothamii
  401198008	Legionella serotype
  433048001	Legionella taurinensis
  115109005	Mycoplasmataceae
  703886001	Hepatitis B virus genotype A
  703888000	Hepatitis B virus genotype C
  703889008	Hepatitis B virus genotype D
  703890004	Hepatitis B virus genotype E
  703893002	Hepatitis B virus genotype H
  414810006	Neisseria meningitidis non-groupable
  603423001	Hepatitis C virus genotype 2
  603427000	Hepatitis C virus genotype 6
  722356002	Neisseria meningitidis, beta lactamase positive
  115072003	Neisseriaceae
  603413005	Hepatitis C virus subtype 1a
  603414004	Hepatitis C virus subtype 1b
  603428005	Hepatitis C virus subtype 1c
  432579003	Leptospira alexanderi
  432580000	Leptospira fainei
  603415003	Hepatitis C virus subtype 2a
  115069005	Leptospiraceae
  603416002	Hepatitis C virus subtype 2b
  603429002	Hepatitis C virus subtype 2c
  103443003	Haemophilus influenzae type c
  603421004	Hepatitis C virus subtype 4a
  603430007	Hepatitis C virus subtype 4b
  603431006	Hepatitis C virus subtype 4c
  603433009	Hepatitis C virus subtype 4e
  603420003	Hepatitis C virus subtype 6a
  608946009	Genus Giardia cyst
  726497006	Fluoroquinolone resistant Campylobacter
  243590000	Family Reoviridae
  458125000	Escherichia coli serotype O26:H11
  55288009	Genus Vesiculovirus
  459101001	Escherichia coli serotype O103:H2
  457832008	Escherichia coli serotype O165:H25
  458045006	Escherichia coli serotype O2:H7
  457132006	Escherichia coli serotype Orough:H9
  103508002	Coxiella burnetii, phase I
  103509005	Coxiella burnetii, phase II
  414202000	Coxiellaceae
  459100000	Escherichia coli serotype O104:nonmotile
  459081000	Escherichia coli serotype O113:H21
  458118007	Escherichia coli serotype O22:H8
  106613003	Family Plasmodiidae
  736946001	Cryptococcus gattii genotype VGI
  736945002	Cryptococcus gattii genotype VGIII
  736944003	Cryptococcus neoformans var. grubii genotype VNI
  736943009	Cryptococcus neoformans var. grubii genotype VNII
  106610000	Cryptosporidiidae
  416762004	Cryptosporidium canis
  416961000	Cryptosporidium felis
  46665004	Cryptosporidium meleagridis
  4779006	Cryptosporidium muris
  404679009	Glycopeptide resistant Staphylococcus aureus
  459087001	Escherichia coli serotype O111:nonmotile
  459070003	Escherichia coli serotype O118:H2
  458075001	Escherichia coli serotype O121:H19
  608958009	Cyclospora cayetanensis oocyst
  459113006	Escherichia coli serotype O91:H21
  115085000	Family Bartonellaceae
  243615000	Family Bunyaviridae
  407444007	Cytomegalovirus
  608957004	Genus Cryptosporidium oocyst
  608962003	Genus Plasmodium gametocyte
  60588009	Dengue virus, type 1
  41328007	Dengue virus, type 2
  8467002	Dengue virus, type 3
  36700002	Dengue virus, type 4
  706997008	Escherichia coli serotype O112:H2
  458082002	Escherichia coli serotype O118:H12
  458063006	Escherichia coli serotype O14:nonmotile
  457859000	Escherichia coli serotype O163:H19
  457825004	Escherichia coli serotype O165:nonmotile
  458142006	Escherichia coli serotype O45:H2
  459114000	Escherichia coli serotype O91:H10
  459112001	Escherichia coli serotype O91:nonmotile
  417207000	Escherichia coli, inactive
  106615005	Family Babesiidae
  114245005	Family Campylobacteraceae
  128377001	Family Herpesviridae
  407326003	Family Rhabdoviridae
  450963008	Cocal virus
  726499009	Fluoroquinolone resistant Shigella
  699407008	Genus Entamoeba cyst
  699552009	Genus Plasmodium schizont
  128357008	Genus Rubulavirus
  243639005	Gerstmann-Straussler syndrome agent
  406605001	Glycopeptide intermediate Staphylococcus aureus
  419036000	Domain Archaea
  409822003	Domain Bacteria
  415671008	Domain Eukarya
  733594004	Escherichia coli serogroup O:nonmotile
  459099008	Escherichia coli serotype O104:H21
  459086005	Escherichia coli serotype O111:H2
  459088006	Escherichia coli serotype O111:H8
  459069004	Escherichia coli serotype O118:H16
  115083007	Ehrlichieae
  458056006	Escherichia coli serotype O128:H2
  458054009	Escherichia coli serotype O128:nonmotile
  458062001	Escherichia coli serotype O137:H41
  457435002	Escherichia coli serotype O145:nonmotile
  457331007	Escherichia coli serotype O153:H2
  457324008	Escherichia coli serotype O153:H25
  457907005	Escherichia coli serotype O157:nonmotile
  609353001	Escherichia coli serotype O1:nonmotile
  458117002	Escherichia coli serotype O22:H5
  458126004	Escherichia coli serotype O26:nonmotile
  458046007	Escherichia coli serotype O2:H6
  458146009	Escherichia coli serotype O48:H21
  458149002	Escherichia coli serotype O50:H7
  458157004	Escherichia coli serotype O55:H7
  458094006	Escherichia coli serotype O5:nonmotile
  459132000	Escherichia coli serotype O79:H7
  459127001	Escherichia coli serotype O83:H1
  459117007	Escherichia coli serotype O9:nonmotile
  243627002	Family Caliciviridae
  407325004	Family Filoviridae
  106583000	Family Hexamitidae
  115071005	Family Legionellaceae
  106612008	Family Sarcocystidae
  106579000	Family Trypanosomatidae
  106598003	Entamoebidae
  303349001	Enteroadherent Escherichia coli
  417513008	Enterococcaceae
  707768008	Enterococcus faecium genotype vanA
  707769000	Enterococcus faecium genotype vanB
  710875008	Fluoroquinolone resistant bacteria
  409805000	Fluoroquinolone-resistant Neisseria gonorrhoeae
  735270003	Enterohemorrhagic Escherichia coli not O157:H7
  733595003	Enterohemorrhagic Escherichia coli serogroup O:nonmotile
  407310004	Enterohemorrhagic Escherichia coli, serotype O rough:H9
  407281008	Enterohemorrhagic Escherichia coli, serotype O103:H2
  407283006	Enterohemorrhagic Escherichia coli, serotype O104:nonmotile
  407160000	Enterohemorrhagic Escherichia coli, serotype O111:H2
  407285004	Enterohemorrhagic Escherichia coli, serotype O111:H8
  407159005	Enterohemorrhagic Escherichia coli, serotype O111:nonmotile
  106567000	Form family Cryptococcaceae
  106569002	Form family Moniliaceae
  407293004	Enterohemorrhagic Escherichia coli, serotype O121:H19
  407297003	Enterohemorrhagic Escherichia coli, serotype O137:H41
  407299000	Enterohemorrhagic Escherichia coli, serotype O145:nonmotile
  407260008	Enterohemorrhagic Escherichia coli, serotype O14:nonmotile
  432830002	Francisella tularensis subspecies japonica
  407300008	Enterohemorrhagic Escherichia coli, serotype O153:H2
  426557003	Francisellaceae
  407301007	Enterohemorrhagic Escherichia coli, serotype O153:H25
  407527006	Coltivirus subgroup A
  407303005	Enterohemorrhagic Escherichia coli, serotype O163:H19
  407306002	Enterohemorrhagic Escherichia coli, serotype O165:H25
  407305003	Enterohemorrhagic Escherichia coli, serotype O165:nonmotile
  407308001	Enterohemorrhagic Escherichia coli, serotype O172:nonmotile
  407251000	Enterohemorrhagic Escherichia coli, serotype O1:nonmotile
  407262000	Enterohemorrhagic Escherichia coli, serotype O22:H5
  407263005	Enterohemorrhagic Escherichia coli, serotype O22:H8
  407265003	Enterohemorrhagic Escherichia coli, serotype O26:H11
  407264004	Enterohemorrhagic Escherichia coli, serotype O26:nonmotile
  407253002	Enterohemorrhagic Escherichia coli, serotype O2:H6
  407254008	Enterohemorrhagic Escherichia coli, serotype O2:H7
  407267006	Enterohemorrhagic Escherichia coli, serotype O45:H2
  407269009	Enterohemorrhagic Escherichia coli, serotype O48:H21
  407271009	Enterohemorrhagic Escherichia coli, serotype O50:H7
  407199008	Enterohemorrhagic Escherichia coli, serotype O55:H7
  407256005	Enterohemorrhagic Escherichia coli, serotype O5:nonmotile
  407273007	Enterohemorrhagic Escherichia coli, serotype O79:H7
  407275000	Enterohemorrhagic Escherichia coli, serotype O83:H1
  407278003	Enterohemorrhagic Escherichia coli, serotype O91:H10
  407279006	Enterohemorrhagic Escherichia coli, serotype O91:H21
  407277008	Enterohemorrhagic Escherichia coli, serotype O91:nonmotile
  407258006	Enterohemorrhagic Escherichia coli, serotype O9:nonmotile
  414561005	Fungi
  407477006	Genus Alphainfluenzavirus
  608923007	Genus Babesia trophozoite
  407478001	Genus Betainfluenzavirus
  608927008	Genus Cryptosporidium trophozoite
  699434006	Genus Cyclospora oocyst
  699399003	Genus Entamoeba trophozoite
  608931002	Genus Giardia trophozoite
  243634000	Genus Hepatovirus
  112368004	Genus Lyssavirus
  243621001	Genus Nairovirus
  407466000	Genus Orthobunyavirus
  726500000	ESBL (Extended spectrum beta-lactamase producing) Enterobacteriaceae
  699546008	Genus Plasmodium merozoite
  608934005	Genus Plasmodium trophozoite
  721911002	ESBL Shigella sonnei
  84407002	Genus Pneumovirus
  457541006	Escherichia coli O172:nonmotile
  733593005	Escherichia coli serogroup O
  407230003	Escherichia coli serogroup O112
  407292009	Escherichia coli serogroup O121
  407266002	Escherichia coli serogroup O45
  720716008	Clostridium botulinum Group I type A and F
  41090000	Chlamydophila psittaci variant bovis
  1003795002	Acinetobacter baumannii group
  131203002	Acinetobacter genospecies
  715307006	Carbapenem resistant Escherichia coli
  115293007	Chlamydia trachomatis, serotype D
  720325000	Clostridium botulinum type G
  73517007	Bhanja virus
  115298003	Chlamydia trachomatis, serotype K
  720719001	Clostridium botulinum Group II type E
  243617008	California serogroup Orthobunyavirus
  243357001	Campylobacter sputorum biovar fecalis
  441666003	Castelo dos Sonhos virus
  115289001	Chlamydia trachomatis, serotype A
  115328009	Chlamydia trachomatis, serotype H
  424428001	Chordopoxvirinae
  720709007	Clostridium botulinum Group II
  720312008	Clostridium botulinum Group III type C
  20017000	Clostridium botulinum, type C
  62969002	Ajellomyces capsulatus
  113503004	Borrelia valaisiana
  68638009	Bovine spongiform encephalopathy agent
  430983003	Brucella abortus strain RB51
  450597006	Bundibugyo ebolavirus
  446191000	Campylobacter lari subspecies concheus
  445776001	Campylobacter subantarcticus
  277503000	Cephalosporin-resistant Neisseria gonorrhoeae
  115291009	Chlamydia trachomatis, serotype Ba
  115295000	Chlamydia trachomatis, serotype F
  115297008	Chlamydia trachomatis, serotype J
  115300003	Chlamydia trachomatis, serotype L1
  726494004	Ampicillin resistant bacteria
  726495003	Ampicillin resistant Haemophilus influenzae
  18279000	Chlamydophila psittaci variant ovis
  441618005	Amur virus
  426785004	Chromista
  720712005	Clostridium botulinum Group I type A
  720717004	Clostridium botulinum Group I type B and F
  720722004	Clostridium botulinum Group II type B and E
  720720007	Clostridium botulinum Group II type F
  720711003	Clostridium botulinum Group IV
  18065004	Clostridium botulinum, type A
  8386006	Clostridium botulinum, type E
  115086004	Anaplasmataceae
  442615006	Bermejo virus
  243640007	Animal spongiform encephalopathy agent
  116664008	Black Creek Canal virus
  418248000	Antimicrobial susceptible bacteria
  442513007	Araraquara virus
  243624009	Arenaviridae
  430982008	Brucella abortus, vaccinal strain 19
  719027009	Asaccharolytic non-hemolytic Acinetobacter
  116506004	Brucellaceae
  432459009	Campylobacter hyointestinalis subspecies lawsonii
  448403005	Campylobacter sputorum biovar paraureolyticus
  712662001	Carbapenem resistant Enterobacteriaceae
  415979007	Babesia CA3
  415983007	Babesia duncani
  418101009	Babesia EU1
  415981009	Babesia MO1
  115290005	Chlamydia trachomatis, serotype B
  115292002	Chlamydia trachomatis, serotype C
  115294001	Chlamydia trachomatis, serotype E
  115319008	Chlamydia trachomatis, serotype G
  115296004	Chlamydia trachomatis, serotype I
  418909007	Bacillus anthracis - virulent strain
  442505006	Chlamydia trachomatis, serotype Ja
  115299006	Chlamydia trachomatis, serotype L
  115087008	Chlamydiaceae
  60927005	Chlamydophila psittaci variant felis
  720708004	Clostridium botulinum Group I
  720715007	Clostridium botulinum Group I type A and B
  720713000	Clostridium botulinum Group I type B
  720714006	Clostridium botulinum Group I type F
  720718009	Clostridium botulinum Group II type B
  720721006	Clostridium botulinum Group II type B and F
  720723009	Clostridium botulinum Group II type E and F
  720710002	Clostridium botulinum Group III
  720323007	Clostridium botulinum Group III type D
  720324001	Clostridium botulinum Group IV type G
  413880008	Clostridium botulinum, non-toxin production
  20785008	Clostridium botulinum, type B
  37081000	Clostridium botulinum, type D
  32829006	Clostridium botulinum, type F
  103512008	Bartonella vinsonii
  114228000	Bartonella vinsonii ss berkhoffii
  417657001	Bartonella vinsonii subsp. arupensis
  116665009	Bayou virus
  468121000124108	Mycobacterium mucogenicum group
  44651000087108	Staphylococcus aureus complex
  1269429001	Yersiniaceae
  1263733001	SARS-CoV
  1263732006	SARSr-CoV
  703759007	Taenia solium adult
  703756000	Genus Taenia adult
  703632006	Genus Taenia egg
  609075007	Trichinella spiralis larva
  609074006	Genus Trichinella larva
  609056002	Trichinella spiralis adult
  609055003	Genus Trichinella adult
  609043009	Phylum Nemata adult
  284724005	Class Cestoda egg
  284722009	Phylum Nemata larva
  106724005	Family Taeniidae
  106675003	Superfamily Trichinelloidea
  53747007	Class Cestoda larva
  17894007	Cysticercus cellulosae

Generated Narrative: ValueSet

Expansion from tx.fhir.org based on SNOMED CT 900000000000207008 edition 01-Aug 2024

This value set contains 1,000 concepts